2ycc
-4a) What does this protein do?
-4b)What is the resolution?

Root: scop
-4c) What animal/vegtible/bacteria (species) does 2ycc come from?
Look at the Family: monodomain cytochrome c
-4d) How many different organisms have a crystal structure of Mitochondiral cytochrome c available?

red 3-12 (looking down this helix in figure below)
red 38-40 (strand)
orange 51-54
orange 57-59 (strand)
yellow 61-68
green 72-74
cyan 88-102 (looking along this helix in figure below)

Look at Structure Analysis: Geometry; MolProbity Ramachadran Plot

4e) Are the phi/psi angles within low energy regions?
4f) Print this plot out and lable the helix, sheet regions on the plot.

Look at Structure Analysis: Geometry, Procheck "
4g) Look at Protein chain link; Look at the ProMotif: 5 helices; which of the 5 is most likely to be buried; which side of helix 1 and 5 are most likely to be solvent exposed.
Look at the Ligands: HEM page (back to main Procheck page).
4h) How many residues are touching the heme? Name 3.
4i) What residues are shown as being attached to the Heme iron (residues connected by blue line to central purple atom)?